Haplodiv
Résumé
This TURBO PASCAL program is based on the paper by Odile Pons and Rémy J. Petit (TAG 1995, 90:462-470). It computes measures of diversity and differenciation from haploid population genetic data.
The source file should be an ASCII file (its name should have 8 characters maximum: 12345678.txt) and should include the following information :
First line : Number of cytotypes Number of populations. See the example (example.txt and example.out): 12 41
The program is dimensionned for a maximum number of 25 cytotypes and of 200 populations. If you have more than this, it means the PASCAL program haplodiv.pas should be modified accordingly and re-compiled. Indicate then the number of individuals having a given cytotype (column) in a given population (row). Example: 0 0 0 0 0 0 0 0 3 1 0 0
0 0 0 0 0 0 0 0 3 0 0 0
0 0 0 0 0 0 0 0 5 0 0 0
0 0 0 3 0 0 0 0 0 0 0 0
etc... (12 colomns x 41 rows)
No column should be empty (no missing haplotype) and each population (row) should be composed of AT LEAST 3 individuals!